BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D08SP1|AL426029
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1044 1554 0.0
>3x_Contig1044
Length = 4552
Score = 1554 bits (782), Expect = 0.0
Identities = 787/791 (99%)
Strand = Plus / Minus
Query: 1 ttttattattaactaaagttttctagatgataattgcttagtttctttttctgaatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2095 ttttattattaactaaagttttctagatgataattgcttagtttctttttctgaatcttc 2036
Query: 61 tgtctctaacagcagaaacagaggaaacggataatggcaacttcaaacccaaagagttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 tgtctctaacagcagaaacagaggaaacggataatggcaacttcaaacccaaagagttga 1976
Query: 121 ccaattcagcggtttgagtgtcaacgntcaagacgtcgttagagtgagacaagtccaaag 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1975 ccaattcagcggtttgagtgtcaacgttcaagacgtcgttagagtgagacaagtccaaag 1916
Query: 181 cagagacatctggaacgtattgatcctttctttctctttcttcttcttgcaacttgaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1915 cagagacatctggaacgtattgatcctttctttctctttcttcttcttgcaacttgaagg 1856
Query: 241 aaatacctctaactggacccttttggattctcttcatcaaatgggtggtgtaaccagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 aaatacctctaactggacccttttggattctcttcatcaaatgggtggtgtaaccagcaa 1796
Query: 301 tcttgtttctcaatctcttagattggatggtagcgatttcgtcacacaatctcttgttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1795 tcttgtttctcaatctcttagattggatggtagcgatttcgtcacacaatctcttgttgg 1736
Query: 361 tttggaaatccatggkcaactttggatagtacttttcaatcaaagccttggaggcacgcy 420
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 tttggaaatccatggtcaactttggatagtacttttcaatcaaagccttggaggcacgct 1676
Query: 421 tgacggtcttggttctaactctaccctactcaaataatatcaacgaatcgatttgatctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 tgacggtcttggttctaactctaccctactcaaataatatcaacgaatcgatttgatctt 1616
Query: 481 gttagtaaaagtggcttcattttatattgcttctgcgaaaacttccatggaagatagacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 gttagtaaaagtggcttcattttatattgcttctgcgaaaacttccatggaagatagacc 1556
Query: 541 tgagaaagaatttgatcctgtgaagttcatcattttgggggaaataattggacatatgcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 tgagaaagaatttgatcctgtgaagttcatcattttgggggaaataattggacatatgcg 1496
Query: 601 ttcgtttcgtcaactttattacatgtgagagacctttaacgttagggtgatgaactccat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 ttcgtttcgtcaactttattacatgtgagagacctttaacgttagggtgatgaactccat 1436
Query: 661 taatactgtgttggatatgatgttgtggtagctcatatactaatcaatgcaggccgtttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 taatactgtgttggatatgatgttgtggtagctcatatactaatcaatgcaggccgtttg 1376
Query: 721 ctttattttgttccattttacatcagacggagttttgatccttactgtgggkcacaatac 780
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1375 ctttattttgttccattttacatcagacggagttttgatccttactgtgggtcacaatac 1316
Query: 781 tggaacatggt 791
|||||||||||
Sbjct: 1315 tggaacatggt 1305
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7565
Number of Sequences: 1807
Number of extensions: 7565
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)